This one beats "why is there still monkeys?"

Incl. intelligent design, belief in divine creation

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Re: This one beats "why is there still monkeys?"

#41  Postby Calilasseia » Jul 28, 2017 3:18 am

Wortfish wrote:
Calilasseia wrote:

In short, they're engaging in desperate twisting of the facts to fit their mythology fetish.

The mere fact that it's possible to construct a molecular phylogeny for the entire tree of life, destroys their wishful thinking. Because if their assertions were something other than rectal products, the data in question would not even exist.


They would argue that molecular phylogeny is made possible only because of a common genetic design rather than a common ancestry. They would also argue that the "kinds" can be proved by the fact that interbreeding is possible between species of the same kind but not between species of different kinds.


Except that the requisite apologetics is bullshit for numerous reasons.

One, we have evidence for inheritance followed by the acquisition of modifications, on a grand scale. We have zero evidence for magic conjuring tricks by an invisible magic man.

Two, as anyone in the world of software development will tell you (and I'm one of those people), a major aim of human designers is to produce core components that can be re-used frequently, without modification. Not least because this saves a hell of a lot of money on product development, when it's done correctly, but more importantly, facilitates the development of new prototypes for testing. In the case of critical components, it's understood that modification thereof is undertaken at one's peril.

But, when we look at a sample critical component in the natural world, namely the insulin gene in vertebrates, this has been subject to modification time and again across a vast span of lineages. I covered this in more detail here seven years ago, and the essential details still stand.

Now, we're all familiar with creationist assertions to the effect that any mutation will purportedly break something that works,(though the literature documenting known beneficial mutations stuffs them on that point as well, as does the volume of work done since Kimura's neutral theory. Those assertions about the purported "inevitability" of mutations being deleterious, are manifestly incompatible with any idea that a gene for a critical component, such as insulin in vertebrates, can undergo modification and still work. Yet, that's what the evidence tells us - insulin genes, whilst subject to a high degree of conservation, are not identical across vertebrate lineages by any means, and have undergone modification with the passage of generations.

Any "designer" proliferating lots of modifications of a critical component, would actually be violating the basic rules of design, as understood in the world of human design. Since human design is, effectively, the only well-studied model we have for information on this - and indeed, said model is frequently plundered for apologetic purposes by creationists, though usually with a heavy leavening of incompetence and duplicity - any attempts to use that model as being [1] applicable to supernatural magic design, something that has never been directly observed, or [2] a prescriptive account of the biosphere, when it fails even to be competent as a descriptive model, are doomed for the obvious reasons to those of us who paid attention in class.

This is before we examine in detail the hilarity ensuing from creationist attempts to erect assertions about "kinds", a term that has no scientific validity, and one that means different things to different creationists (ah, the heady, pungent aroma of anti-consilience is once again detected!). Enjoy a particularly hilarious example thereof here, which gives us this famous graphic:

Creationist Hominid Skull Fail.jpg
Creationist Hominid Skull Fail.jpg (271.84 KiB) Viewed 1972 times


Worse still, the requisite apologetics frequently betray not only scientific ignorance on a vast scale, but point to the typical creationist have a three-year-old's understanding of basic taxonomy, let alone anything as advanced as molecular phylogeny. For example, when it comes to the ridiculous attempts to rearrange Linnaean taxonomy, for the sole purpose of erecting an entirely specious and synthetic "special status" for humans, creationists routinely demonstrate that they don't even care about most of the phyla on the planet, and the consequences thereof arising from their fatuous assertions. So long as they can preserve their precious mythological "special status" for humans, they don't give a shit about the rest of the biosphere, except as a source of hamburgers and fries. Which is why we see hilarity, such as the assertion that "kind" corresponds to Genus for mammals, Family for the likes of birds, reptiles and fish, and anything up to SuperClass for many invertebrates. Meaning, by extension, that hybridisation is, according to those creationist assertions, purportedly possible between any members of the taxonomic subdivisions nested therein. Except that, whoops, hybridisation across taxonomic categories that large has not, to my knowledge, been observed, let alone documented, by biologists, who have had plenty of time to track such occurrences down. Furthermore, hybridisation is frequently an indicator to biologists, that the species in question have not yet completely diverged, and are still in the process of acquiring complete interfertility failure after the splitting of the common ancestral population. Indeed, I've presented here numerous scientific papers documenting this very process, including a superb paper by Diane Dodd, describing an experiment in this vein that you can perform in your own back yard greenhouse if you want to. I emphasise that for good reason.

Indeed, that's another enormous misunderstanding that creationists routinely exhibit about evolution, aside from the more fatuous ones that give rise to the likes of Ray Comfort's risible "crocoduck", or the "I've never seen a cat give birth to a dog" bullshit that is a more direct product of the misunderstanding I'm covering here. Namely, they think of ancestors in terms of individuals, the way we humans have tended to for millennia as a result of our own insular concerns about parenthood, whereas evolutionary biologists, at least the rigorous ones, have in mind ancestral populations. Specifications for ancestral individuals in the literature are, at least when conducted properly, performed principally as an aid to understanding, and to provide an archetype for the population of interest. Now it may well be possible, given enough collected data, and a rigorous generation-by-generation audit trail, to link a modern population to a specific past individual, courtesy of the fact that said individual's genes are present throughout the descendant population, but since we don't have audit trails at this level, we have to content ourselves with the data we have. But, analysis of data from matings of known provenance (including controlled matings in laboratories) has provided scientists with the tools they need to know what to look for in the case of matings of unknown provenance, and detect with confidence ancestry therefrom.

That data is conclusive - we are not "special", or isolated from the rest of the biosphere, but a direct product thereof, and intimately linked via inheritance to everything from bacteria through fungi, to eagles and lions. We, along with every other terrestrial vertebrate on the planet, are basically Sarcopterygian fish that got too big for our boots. As for the connection we humans have with the other great apes, which creationists hate with visceral passion, it's tough shit - they're going to have to suck on the mountains of data pointing in this direction. Data such as shared broken genes and shared endogenous retriviral insertions, that could only have arisen in our genome through shared ancestry. In short, it's Game Over for creationist bullshit, and no amount of fabrication is going to elevate their bullshit above the level of bullshit.
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Re: This one beats "why is there still monkeys?"

#42  Postby Rumraket » Jul 28, 2017 8:02 am

Animavore wrote:
Wortfish wrote:

They would argue that molecular phylogeny is made possible only because of a common genetic design rather than a common ancestry.

They are still left having to explain ERVs.

Not just ERVs, the claim "common design" actually doesn't explain the evidence for common ancestry from molecular phylogenies. So they're still left having to explain molecular phylogenetics, in it's entirety. Saying "it's just common design" doesn't actually accomplish that.

I wrote a lengthy post taking it apart here: http://theskepticalzone.com/wp/phylogeny-the-bigger-picture/comment-page-1/#comment-131053

Not to mention that whole OP by Allan Miller also completely refutes the "common design" tripe: http://theskepticalzone.com/wp/phylogeny-the-bigger-picture/

"Common design" does not and can not explain the evidence for common descent from molecular phylogenetics. It is just some bullshit phrase creationists are taught to say without them ever thinking any more deeply about it.
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Re: This one beats "why is there still monkeys?"

#43  Postby Rumraket » Jul 28, 2017 8:05 am

On another forum I also wrote a lengthy post to explain how molecular phylogenetics implies common descent, as in I explain the underlying logic of phylogenetic inferences:
Rumraket wrote:
leroy wrote:OK so you obviously know what my answer would be, so there is no need for details, because you have heard this answer multiple times.

sure in your example we have some diversity of squirrels, this diversity was caused by evolution (random genetic change and natural selection) and you can even get to a point where you can call these 2 populations of squirrels a different specie

we both agree that evolution can account for at least some of the diversity that we see, so how do you go from some diversity to all diversity, how does accepting your "squirrel example " implies that I also have to accept that squirrels came from ancient fish-like organisms trough the same mechanism.

how does accepting squirrel to squirrel evolution, implies that I also have to accept fish to squirrel evolution?

Because we can derive a very particular prediction from the hypothesis that they do, and then we can test this prediction using observation.

Allow me to elaborate with a hypothetical idealistic example designed to make the principle understandable.

The specific prediction is commonly known by the name of The Twin Nested Hiearchy Of Life.

In general terms the prediction goes as follows: If three or more taxa share common descent trough a common genealogical process of branching descent with modification, we should be able to construct highly congruent phylogenetic trees from objective but independent data sets.

You might now ask: What the hell does that mean, and why is this uniquely a prediction of evolution and not a prediction of creationism/Intelligent Design?

Because if they (the three taxa) share descent with the gradual accumulation of changes, more closely related taxa which share more recent descent, should also be closer together in the phylogenetic tree because fewer changes in character states should separate them. Because there have been fewer replication events for mutations to creep in since they split into independent lineages.

Think about it for a moment. Lets take a really simple hypothetical example and see if we assume evolution over time what we can then predict about what kind of evidence this process should leave behind.

Say there is a species A and this species reproduces asexually (just to make it simple) so the individial members of the population makes copies of itself. Like when a cell divides. Say the organism has four genes, G1, G2, G3 and G4 and these mutate randomly along the way every generation. Maybe each gene gets a single random mutation every generation to keep it simple.

This A organism divides into two (that we call A1 and B1), so now we have two independent lineages. So we have lineage A, and lineage B now. A1 is the species of the A lineage at generation 1, B1 is the species of the B lineage at generation 1.

The two are initially very similar in the chosen character state (to make it simple we just use DNA sequence) at the first generation. At generation 1, they are only separated by two mutations in any one of their genes. Gene G1 in A1, is different from A0 by 1 mutation, Gene G1 B1 is different from A0 by 1 mutation. And the mutation is not the same in A1 and B1 gene G1, so they differ from each other by a total of 2 mutations.

The next generation, the newest offspring (A2 and B2) are slightly less similar (more mutations separate them). The ancestors (A0, A1 and B1) die (maybe of old age, or disease, doesn’t matter). The generation after again, the latest offspring (A3 and B3) have diverged even further (even more mutations have crept in). And so on.

At some point, maybe a new lineage emerges (B10 splits into B11 and C1) so now there are three independent lineages. The C lineage will always be more similar to the B lineage, than it is to the A lineage, right? Because more generations, and thus more mutations, separate the A lineage from the B and C lineage, than separate the B and C lineage. Because A and B diverged and went through multiple generations (in this case, 10 generations), before C and B diverged.

So what tree would we expect from gene G1, say three generations after the B-C split?

Well, we will have a tree with three branches because we have three taxa of course. How will it look? Well in our hypothetical example here we have rooting information, we know this started with a split between A and B. So we start with a node that splits into two branches A and B. How long should the branches that separate A and B be? Well we’ve been going for 13 generations, and one mutation creeps into G1 every generation, so both lineages must have accumulated 13 mutations independently. So each branch must be 13 "units" in length, separating A13 and B13 by 26 total distance units (the distance units here refer to mutations, but when drawing the tree on a piece of paper you can make it inches, centimeters or whatever you want).

Then there’s the C-branch, where to place that one? Well we know that the split happened at generation 10, so that’s of course where we put the C branch on the B branch.

So we can see now that our simple model of evolution predicts that gene G1 from B13, should be more similar to G1 from C3, than G1 from A13.

Okay, but how will the tree we predict look for gene G2? And G3? And G4?

Well, since G2 went through the same exact same genealogical process as G1, it should of course produce the same tree. Because G2 also went on for 10 independent generations after the A-B split, and then the B-C split happened and G2 should diverge between B and C from then on for another three generations.

And same with G3 and G4.

I trust that you can see why this should be so. Admittedly this is very idealized and simplified, but this is basically the principle by which evolution predicts that independent data set should produce the same trees. That’s why, if the organisms we see really did go through a common genealogical relationship of gradual accumulation of changes from common ancestors, the trees we construct from independent genetic data should be congruent. And congruent just means show the same overall branching order.

At this stage you might be tempted to reply that designers can also design nesting hiearchies. And you might even give an example of an actual nesting hiearchy we know was designed: The folder system on your computer. An actual nesting hierarchy that was designed. But! Does this single nesting hiearchy PREDICT that trees constructed from multiple independent data sets should produce the same branching patterns? No, it actually doesn't. And you can test this for yourself:
While the folder system in your computer is a nesting hiearchy, there are folders within folders, it does not represent a multiple nesting hiearch. Like the "twin" nested hiearchy of life.

What do I mean by this?

Suppose I didn’t tell you the order of folders, and asked you to construct an independent tree from each of their properties (filename or folder name, number of files contained, length of file name, total size of content, size of individual files, file-change-dates, proportion of file-name-length that are letters versus numbers, and so on), would you expect that the tree you construct using the differences in file-sizes would be congruent with the tree you construct using number of files? Or the change-dates? You wouldn’t expect that at all, there is almost never a systematic relationship between the actual order of folders and the properties of those folders and their contents (there’s nothing that says a new file can’t go in an older folder, for example). The names of the folders inside your Windows-folder do not yield trees that display the same hiearchical branching order as you would get if you used the total number of files, or the lengths of the file names or any other property.

Which is why I’m not saying “a nested hierarchy” is a prediction of evolution. I specifically used the term “twin nested hierarchy”, and by that I really mean multiple highly congruent nesting hiearchies constructed from independent data. In particular, I meant my elaboration above. The particular hypothetical example I gave was one using a QUADRUPLE nesting hierarchy because it was constructed using four independent data sets (one from each of the four genes G1, G2, G3, and G4). That using independent data sets to build your hierarchy from, you’re going to come up with the roughly the same branching pattern over and over and over again.

For reasons already elaborated on here above, evolution really does predict that independent data sets (sequences from different genes, for example, or trees constructed from morphology compared to trees constructed from gene sequences) yield similar branching patterns.

So of all the hypotheses we can construct, the only one that absolutely DEMANDS that we can build the same overall branching patterns from independent data sets, is the theory that the taxons in question share a common genealogical relationship of branching decent with modification.

Now you might ask how we know the data sets we use from different genes really are independent? Because we know something about the physiology of the organism. For example, we know that the cause of the gene sequence of your cytochrome C gene, is not the cause of the gene sequence of your GAPDH gene. Nor are either of these genes the cause of your particular anatomical arrangements (nor the other way around).

To pick an example, the amino acid sequence of cytochrome C is not causing you to have a spine (aka, be a vertebrate), or to have four limbs (be a tetrapod), or to have mammary glands (be a mammal). How do we know this? Muhc of life on Earth has the cytochrome C gene, but not all of that life on Earth has a spine, or four limbs, or mammary glands. Also, the cytochrome C gene has been experimentally taken from humans (or cows, or pigs, or birds, or fish IIRC), and replaced the cytochrome C gene in yeast, or wheat, or E coli, and they didn’t grow a spine, four limbs or mammary glands. They worked just as they did before. It’s a core metabolic enzyme, it catalyzes the same basic chemical reaction in the electron transport chain.

As such, a tree constructed using cytochrome C amino acid sequence should not correlate with one constructed from comparative anatomical traits (or with another metabolic enzyme) except if they share a common genealogical realtionship of branching descent with modification. This is why, if the trees contructed from both agree with each other, this is evidence for evolution because only evolution would make us expect them to agree.

Systematists have constructed trees from dusins and dusins of independent genes (or genes and morphology) and found they agree to an astonishing level of accuracy.

There is only one rational explanation for this observation. They share a common genealogical realtionship of branching descent with modification. In other words, they evolved from common ancestors.
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Re: This one beats "why is there still monkeys?"

#44  Postby Rumraket » Jul 28, 2017 8:06 am

Common design does not, in any way, explain away the evidence for common descent.

Yes, creationists are taught to brainlessly parrot those words in response to molecular phylogenetics, but it doens't actually work.
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Re: This one beats "why is there still monkeys?"

#45  Postby Rumraket » Jul 28, 2017 8:08 am

Have you noticed how Wortfish is basically pusing ID-creationism, but gets away with it merely by pretending not to be one.

Instead of saying "common design", he says "creationists would say common design"?
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Re: This one beats "why is there still monkeys?"

#46  Postby Wortfish » Aug 02, 2017 12:08 pm

Calilasseia wrote:
That data is conclusive - we are not "special", or isolated from the rest of the biosphere, but a direct product thereof, and intimately linked via inheritance to everything from bacteria through fungi, to eagles and lions. We, along with every other terrestrial vertebrate on the planet, are basically Sarcopterygian fish that got too big for our boots. As for the connection we humans have with the other great apes, which creationists hate with visceral passion, it's tough shit - they're going to have to suck on the mountains of data pointing in this direction. Data such as shared broken genes and shared endogenous retriviral insertions, that could only have arisen in our genome through shared ancestry. In short, it's Game Over for creationist bullshit, and no amount of fabrication is going to elevate their bullshit above the level of bullshit.


Interesting you say this because Alfred Russel Wallace, Darwin's co-discover of natural selection, admitted that humans were special creatures and that our intellectual, moral and physical faculties could not have been produced by evolution but by an act of divine intervention: The Limits of Natural Selection as Applied to Man http://people.wku.edu/charles.smith/wallace/S165.htm
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Re: This one beats "why is there still monkeys?"

#47  Postby Animavore » Aug 02, 2017 12:18 pm

What a thoroughly racist and ignorant article. Wallace would not have been privy to the work done on proto-morals in primates, or Bill Hamilton's rule of kin selection.
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Re: This one beats "why is there still monkeys?"

#48  Postby Wortfish » Aug 02, 2017 1:11 pm

Animavore wrote:What a thoroughly racist and ignorant article. Wallace would not have been privy to the work done on proto-morals in primates, or Bill Hamilton's rule of kin selection.


Back then, most people were racist. Darwin was a racist and predicted the elimination of savages by civilized races.
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Re: This one beats "why is there still monkeys?"

#49  Postby Animavore » Aug 02, 2017 1:13 pm

Wortfish wrote:
Animavore wrote:What a thoroughly racist and ignorant article. Wallace would not have been privy to the work done on proto-morals in primates, or Bill Hamilton's rule of kin selection.


Back then, most people were racist. Darwin was a racist and predicted the elimination of savages by civilized races.


Where?
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Re: This one beats "why is there still monkeys?"

#50  Postby Wortfish » Aug 02, 2017 1:15 pm

Rumraket wrote:Have you noticed how Wortfish is basically pusing ID-creationism, but gets away with it merely by pretending not to be one.

Instead of saying "common design", he says "creationists would say common design"?


I'm just reporting what creationists themselves say. We have several options for explaining commalities.

1. Common ancestry.
2. Common design.
3. Common development (convergence).
4. Common happenstance (conincidence).
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Re: This one beats "why is there still monkeys?"

#51  Postby Wortfish » Aug 02, 2017 1:19 pm

Animavore wrote:
Wortfish wrote:
Animavore wrote:What a thoroughly racist and ignorant article. Wallace would not have been privy to the work done on proto-morals in primates, or Bill Hamilton's rule of kin selection.


Back then, most people were racist. Darwin was a racist and predicted the elimination of savages by civilized races.


Where?


"At some future period, not very distant as measured by centuries, the civilised races of man will almost certainly exterminate and replace throughout the world the savage races" Descent of Man p. 105
http://charles-darwin.classic-literatur ... ge-105.asp
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Re: This one beats "why is there still monkeys?"

#52  Postby Thomas Eshuis » Aug 02, 2017 5:47 pm

Wortfish wrote:
Calilasseia wrote:
That data is conclusive - we are not "special", or isolated from the rest of the biosphere, but a direct product thereof, and intimately linked via inheritance to everything from bacteria through fungi, to eagles and lions. We, along with every other terrestrial vertebrate on the planet, are basically Sarcopterygian fish that got too big for our boots. As for the connection we humans have with the other great apes, which creationists hate with visceral passion, it's tough shit - they're going to have to suck on the mountains of data pointing in this direction. Data such as shared broken genes and shared endogenous retriviral insertions, that could only have arisen in our genome through shared ancestry. In short, it's Game Over for creationist bullshit, and no amount of fabrication is going to elevate their bullshit above the level of bullshit.


Interesting you say this because Alfred Russel Wallace, Darwin's co-discover of natural selection, admitted that humans were special creatures and that our intellectual, moral and physical faculties could not have been produced by evolution but by an act of divine intervention: The Limits of Natural Selection as Applied to Man http://people.wku.edu/charles.smith/wallace/S165.htm

Do you know what an appeal to authority fallacy is?
"Respect for personal beliefs = "I am going to tell you all what I think of YOU, but don't dare retort and tell what you think of ME because...it's my personal belief". Hmm. A bully's charter and no mistake."
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Re: This one beats "why is there still monkeys?"

#53  Postby Thomas Eshuis » Aug 02, 2017 5:49 pm

Wortfish wrote:
Animavore wrote:What a thoroughly racist and ignorant article. Wallace would not have been privy to the work done on proto-morals in primates, or Bill Hamilton's rule of kin selection.


Back then, most people were racist. Darwin was a racist and predicted the elimination of savages by civilized races.

Correction he argued that, from a purely survival of the fittest view, the civilised people should not encourage the reproduction of the weak and savage.
However he also admits that reality, or at least human society doesn't operate on SotF and that it would be highly immoral to prevent 'lesser' people from procreating.
"Respect for personal beliefs = "I am going to tell you all what I think of YOU, but don't dare retort and tell what you think of ME because...it's my personal belief". Hmm. A bully's charter and no mistake."
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Re: This one beats "why is there still monkeys?"

#54  Postby Thomas Eshuis » Aug 02, 2017 5:50 pm

Wortfish wrote:
Rumraket wrote:Have you noticed how Wortfish is basically pusing ID-creationism, but gets away with it merely by pretending not to be one.

Instead of saying "common design", he says "creationists would say common design"?


I'm just reporting what creationists themselves say. We have several options for explaining commalities.

1. Common ancestry.
2. Common design.
3. Common development (convergence).
4. Common happenstance (conincidence).

Only one two of these actually have any evidence to support them. Can you guess which?
"Respect for personal beliefs = "I am going to tell you all what I think of YOU, but don't dare retort and tell what you think of ME because...it's my personal belief". Hmm. A bully's charter and no mistake."
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Re: This one beats "why is there still monkeys?"

#55  Postby Wortfish » Aug 02, 2017 7:47 pm

Thomas Eshuis wrote:
Only one two of these actually have any evidence to support them. Can you guess which?


Coincidences do happen in evolution, at least at the molecular level.
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Re: This one beats "why is there still monkeys?"

#56  Postby Thomas Eshuis » Aug 02, 2017 8:18 pm

Wortfish wrote:
Thomas Eshuis wrote:
Only one two of these actually have any evidence to support them. Can you guess which?


Coincidences do happen in evolution, at least at the molecular level.

Yes, coincidences do happen, but due to various processes like natural selection, these coincidences are limited and influenced.
"Respect for personal beliefs = "I am going to tell you all what I think of YOU, but don't dare retort and tell what you think of ME because...it's my personal belief". Hmm. A bully's charter and no mistake."
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Re: This one beats "why is there still monkeys?"

#57  Postby proudfootz » Aug 03, 2017 2:28 am

Descent with variation doesn't seem like a coincidence to me.
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Re: This one beats "why is there still monkeys?"

#58  Postby mingthething » Aug 03, 2017 6:56 am

Just ask creationists whether they believe in paternity tests?
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Re: This one beats "why is there still monkeys?"

#59  Postby Rumraket » Aug 03, 2017 12:19 pm

Wortfish wrote:
Calilasseia wrote:
That data is conclusive - we are not "special", or isolated from the rest of the biosphere, but a direct product thereof, and intimately linked via inheritance to everything from bacteria through fungi, to eagles and lions. We, along with every other terrestrial vertebrate on the planet, are basically Sarcopterygian fish that got too big for our boots. As for the connection we humans have with the other great apes, which creationists hate with visceral passion, it's tough shit - they're going to have to suck on the mountains of data pointing in this direction. Data such as shared broken genes and shared endogenous retriviral insertions, that could only have arisen in our genome through shared ancestry. In short, it's Game Over for creationist bullshit, and no amount of fabrication is going to elevate their bullshit above the level of bullshit.


Interesting you say this because Alfred Russel Wallace, Darwin's co-discover of natural selection, admitted that humans were special creatures and that our intellectual, moral and physical faculties could not have been produced by evolution but by an act of divine intervention: The Limits of Natural Selection as Applied to Man http://people.wku.edu/charles.smith/wallace/S165.htm

You can't "admit" to something you don't actually know. For the entire history of evolutionary thought, there have been biologists who thought that evolution could produce our intellectual, moral and physical attributes.
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Re: This one beats "why is there still monkeys?"

#60  Postby Rumraket » Aug 03, 2017 12:22 pm

Wortfish wrote:
Rumraket wrote:Have you noticed how Wortfish is basically pusing ID-creationism, but gets away with it merely by pretending not to be one.

Instead of saying "common design", he says "creationists would say common design"?


I'm just reporting what creationists themselves say. We have several options for explaining commalities.

1. Common ancestry.
2. Common design.
3. Common development (convergence).
4. Common happenstance (conincidence).

But we're not just talking about "commonalities". We are talking about the congruence of independent data sets yielding nesting hiearchies.

The evidence for common descent isn't merely that some things are similar. It's that the things that are similar are similar in such a way, that independent characters can be objectively sorted into congruent nesting hierarchical patterns, which is uniquely a prediction of a process of branching descent with modification.

So we don't have several options, we only have one.
Half-Life 3 - I want to believe
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